WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C39F7.4 Sequence Name  C39F7.4
Length (nt)  618   Chromosome Location  V: 1263074-1263202
Chromosome . Primary Identifier  V Chromosome Location . Start  1263074
Chromosome Location . End  1263202
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39F7.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16905 RAB-1 22.5 205 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00107740
WBRNAi00093202
WBRNAi00008509
WBRNAi00066836
WBRNAi00091953
WBRNAi00079980
WBRNAi00079982
WBRNAi00085545
WBRNAi00082223
WBRNAi00082229
WBRNAi00024787
WBRNAi00042230
WBRNAi00116377
WBRNAi00071719
WBRNAi00064975
WBRNAi00083354
WBRNAi00071516
WBRNAi00076207
WBRNAi00029696
WBRNAi00088558
WBRNAi00101876
WBRNAi00080003
WBRNAi00114594
WBRNAi00079979
WBRNAi00110592
WBRNAi00079981
WBRNAi00116361
WBRNAi00111716
WBRNAi00075916
WBRNAi00115382

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C39F7.4 1263074 1263202 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004266 rab-1 C39F7.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C39F7.4 1263074 1263202 -1
CDS:C39F7.4 1263251 1263451 -1
CDS:C39F7.4 1263507 1263602 -1
CDS:C39F7.4 1263656 1263703 -1
CDS:C39F7.4 1263758 1263878 -1
CDS:C39F7.4 1263934 1263956 -1

1 Sequence

Length
618

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C39F7.4.1 C39F7.4.1 1096   V: 1262629-1263989