WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1005.1b Sequence Name  ZK1005.1b
Length (nt)  6717   Chromosome Location  V: 1276531-1276734
Chromosome . Primary Identifier  V Chromosome Location . Start  1276531
Chromosome Location . End  1276734
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1005.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33259 TANK-1, isoform b 250.3 2238 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00098031
WBRNAi00059031
WBRNAi00021435
WBRNAi00021767
WBRNAi00061225
WBRNAi00098001

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1005.1b 1276531 1276734 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004053 tank-1 ZK1005.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1005.1b 1276531 1276734 -1
CDS:ZK1005.1b 1276794 1277438 -1
CDS:ZK1005.1b 1277490 1277921 -1
CDS:ZK1005.1b 1277971 1278313 -1
CDS:ZK1005.1b 1278802 1279046 -1
CDS:ZK1005.1b 1279093 1281387 -1
CDS:ZK1005.1b 1281698 1283409 -1
CDS:ZK1005.1b 1283460 1283658 -1
CDS:ZK1005.1b 1283708 1284261 -1
CDS:ZK1005.1b 1285597 1285684 -1

1 Sequence

Length
6717

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1005.1b.1 ZK1005.1b.1 6856   V: 1276415-1285707