WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F16B3.1a Sequence Name  F16B3.1a
Length (nt)  2871   Chromosome Location  V: 1289696-1289855
Chromosome . Primary Identifier  V Chromosome Location . Start  1289696
Chromosome Location . End  1289855
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24905 EGL-2, isoform a 108.1 956 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00089853
WBRNAi00044781
WBRNAi00013405
WBRNAi00089905
WBRNAi00090065
WBRNAi00090223

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F16B3.1a 1289696 1289855 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001171 egl-2 F16B3.1 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:F16B3.1a 1289696 1289855 -1
CDS:F16B3.1a 1290013 1290350 -1
CDS:F16B3.1a 1291338 1291622 -1
CDS:F16B3.1a 1291666 1292263 -1
CDS:F16B3.1a 1292314 1292488 -1
CDS:F16B3.1a 1293124 1293448 -1
CDS:F16B3.1a 1293495 1293608 -1
CDS:F16B3.1a 1293654 1293777 -1
CDS:F16B3.1a 1294497 1294520 -1
CDS:F16B3.1a 1295244 1295416 -1
CDS:F16B3.1a 1297529 1297644 -1
CDS:F16B3.1a 1298404 1298532 -1
CDS:F16B3.1a 1298578 1298690 -1
CDS:F16B3.1a 1298950 1299067 -1
CDS:F16B3.1a 1299130 1299208 -1

1 Sequence

Length
2871

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F16B3.1a.1 F16B3.1a.1 3318   V: 1289373-1299332