WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B3.3a.1 Sequence Name  F16B3.3a.1
Length (nt)  699   Chromosome Location  V: 1315643-1317919
Chromosome . Primary Identifier  V Chromosome Location . Start  1315643
Chromosome Location . End  1317919 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044774 F16B3.3 F16B3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B3.3a F16B3.3a 642   V: 1315678-1315911

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16B3.3a.1 1315643 1317919 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171928   269   V: 1315643-1315911 Caenorhabditis elegans
Exon171930   119   V: 1316594-1316712 Caenorhabditis elegans
Exon171932   98   V: 1316804-1316901 Caenorhabditis elegans
Exon171934   68   V: 1316964-1317031 Caenorhabditis elegans
Exon171936   145   V: 1317775-1317919 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16B3.3a.1 1315643 1317919 -1

1 Sequence

Length
699

1 Sequence Ontology Term

Identifier Name Description
transcript