WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B3.1b.1 Sequence Name  F16B3.1b.1
Length (nt)  2880   Chromosome Location  V: 1289696-1299208
Chromosome . Primary Identifier  V Chromosome Location . Start  1289696
Chromosome Location . End  1299208 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001171 egl-2 F16B3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B3.1b F16B3.1b 2880   V: 1289696-1289855

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16B3.1b.1 1289696 1299208 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171952   160   V: 1289696-1289855 Caenorhabditis elegans
Exon171954   338   V: 1290013-1290350 Caenorhabditis elegans
Exon171956   285   V: 1291338-1291622 Caenorhabditis elegans
Exon171958   598   V: 1291666-1292263 Caenorhabditis elegans
Exon171960   175   V: 1292314-1292488 Caenorhabditis elegans
Exon171963   325   V: 1293124-1293448 Caenorhabditis elegans
Exon171965   114   V: 1293495-1293608 Caenorhabditis elegans
Exon171967   124   V: 1293654-1293777 Caenorhabditis elegans
Exon171969   24   V: 1294497-1294520 Caenorhabditis elegans
Exon171971   173   V: 1295244-1295416 Caenorhabditis elegans
Exon171972   125   V: 1297520-1297644 Caenorhabditis elegans
Exon171975   129   V: 1298404-1298532 Caenorhabditis elegans
Exon171977   113   V: 1298578-1298690 Caenorhabditis elegans
Exon171979   118   V: 1298950-1299067 Caenorhabditis elegans
Exon171980   79   V: 1299130-1299208 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16B3.1b.1 1289696 1299208 -1

1 Sequence

Length
2880

1 Sequence Ontology Term

Identifier Name Description
transcript