WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00201332 Gene Name  F16B3.4
Sequence Name  ? F16B3.4 Organism  Caenorhabditis elegans
Automated Description  Enriched in sensory neurons based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  Length (nt)  ? 70
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00201332

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F16B3.4 F16B3.4 70   V: 1292861-1292930
 

Other

0 CDSs

0 RNAi Result

9 Allele

Public Name
gk963591
gk963553
gk964259
gk963850
gk963899
gk963027
gk964509
rg4
WBVar02031774

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00201332 1292861 1292930 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in sensory neuron (labeled by iaIs25[Pgcy-37::GFP + unc-119(+)]) comparing to in whole worm. Fold change > 2, p-value < 0.05. WBPaper00060661:sensory-neuron_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00201332 1292861 1292930 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
70

1 Sequence Ontology Term