WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B7AL.4c.1 Sequence Name  Y75B7AL.4c.1
Length (nt)  3883   Chromosome Location  V: 1373131-1383256
Chromosome . Primary Identifier  V Chromosome Location . Start  1373131
Chromosome Location . End  1383256 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B7AL.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022286 rga-4 Y75B7AL.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B7AL.4c Y75B7AL.4c 3408   V: 1373589-1373846

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B7AL.4c.1 1373131 1383256 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171990   716   V: 1373131-1373846 Caenorhabditis elegans
Exon171997   102   V: 1374062-1374163 Caenorhabditis elegans
Exon172003   619   V: 1374861-1375479 Caenorhabditis elegans
Exon172008   275   V: 1376575-1376849 Caenorhabditis elegans
Exon172015   620   V: 1377836-1378455 Caenorhabditis elegans
Exon172021   736   V: 1379695-1380430 Caenorhabditis elegans
Exon172029   198   V: 1381500-1381697 Caenorhabditis elegans
Exon172036   477   V: 1382125-1382601 Caenorhabditis elegans
Exon172039   140   V: 1383117-1383256 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B7AL.4c.1 1373131 1383256 -1

1 Sequence

Length
3883

1 Sequence Ontology Term

Identifier Name Description
transcript