WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y75B7AL.4g.1 Sequence Name  Y75B7AL.4g.1
Length (nt)  2754   Chromosome Location  V: 1373589-1381670
Chromosome . Primary Identifier  V Chromosome Location . Start  1373589
Chromosome Location . End  1381670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y75B7AL.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022286 rga-4 Y75B7AL.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y75B7AL.4g Y75B7AL.4g 2754   V: 1373589-1373846

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y75B7AL.4g.1 1373589 1381670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon171992   258   V: 1373589-1373846 Caenorhabditis elegans
Exon172001   102   V: 1374062-1374163 Caenorhabditis elegans
Exon172007   619   V: 1374861-1375479 Caenorhabditis elegans
Exon172013   248   V: 1376602-1376849 Caenorhabditis elegans
Exon172019   620   V: 1377836-1378455 Caenorhabditis elegans
Exon172025   736   V: 1379695-1380430 Caenorhabditis elegans
Exon172027   171   V: 1381500-1381670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y75B7AL.4g.1 1373589 1381670 -1

1 Sequence

Length
2754

1 Sequence Ontology Term

Identifier Name Description
transcript