WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09B5.7b.1 Sequence Name  R09B5.7b.1
Length (nt)  1026   Chromosome Location  V: 1451634-1454340
Chromosome . Primary Identifier  V Chromosome Location . Start  1451634
Chromosome Location . End  1454340 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09B5.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005611 srj-23 R09B5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09B5.7b R09B5.7b 1026   V: 1451634-1451822

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09B5.7b.1 1451634 1454340 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172123   189   V: 1451634-1451822 Caenorhabditis elegans
Exon172125   60   V: 1451869-1451928 Caenorhabditis elegans
Exon172127   195   V: 1451977-1452171 Caenorhabditis elegans
Exon172129   117   V: 1452361-1452477 Caenorhabditis elegans
Exon172130   272   V: 1452970-1453241 Caenorhabditis elegans
Exon172132   193   V: 1454148-1454340 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09B5.7b.1 1451634 1454340 1

1 Sequence

Length
1026

1 Sequence Ontology Term

Identifier Name Description
transcript