WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09B5.6.1 Sequence Name  R09B5.6.1
Length (nt)  1022   Chromosome Location  V: 1460369-1461613
Chromosome . Primary Identifier  V Chromosome Location . Start  1460369
Chromosome Location . End  1461613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09B5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019978 hacd-1 R09B5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09B5.6 R09B5.6 900   V: 1460388-1460660

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09B5.6.1 1460369 1461613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172146   292   V: 1460369-1460660 Caenorhabditis elegans
Exon172147   104   V: 1460783-1460886 Caenorhabditis elegans
Exon172148   407   V: 1460933-1461339 Caenorhabditis elegans
Exon172149   219   V: 1461395-1461613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09B5.6.1 1460369 1461613 1

1 Sequence

Length
1022

1 Sequence Ontology Term

Identifier Name Description
transcript