WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09B5.5.1 Sequence Name  R09B5.5.1
Length (nt)  1277   Chromosome Location  V: 1464990-1466360
Chromosome . Primary Identifier  V Chromosome Location . Start  1464990
Chromosome Location . End  1466360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09B5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004139 pqn-54 R09B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09B5.5 R09B5.5 1167   V: 1465014-1465067

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09B5.5.1 1464990 1466360 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172156   78   V: 1464990-1465067 Caenorhabditis elegans
Exon172157   171   V: 1465118-1465288 Caenorhabditis elegans
Exon172158   1028   V: 1465333-1466360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09B5.5.1 1464990 1466360 1

1 Sequence

Length
1277

1 Sequence Ontology Term

Identifier Name Description
transcript