WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38C3.4b.1 Sequence Name  C38C3.4b.1
Length (nt)  1234   Chromosome Location  V: 1482042-1484124
Chromosome . Primary Identifier  V Chromosome Location . Start  1482042
Chromosome Location . End  1484124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C3.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016513 C38C3.4 C38C3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38C3.4b C38C3.4b 993   V: 1482051-1482318

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C38C3.4b.1 1482042 1484124 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172176   277   V: 1482042-1482318 Caenorhabditis elegans
Exon172178   74   V: 1482366-1482439 Caenorhabditis elegans
Exon172180   141   V: 1482589-1482729 Caenorhabditis elegans
Exon172181   250   V: 1482775-1483024 Caenorhabditis elegans
Exon172183   113   V: 1483077-1483189 Caenorhabditis elegans
Exon172185   379   V: 1483746-1484124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C38C3.4b.1 1482042 1484124 1

1 Sequence

Length
1234

1 Sequence Ontology Term

Identifier Name Description
transcript