WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53E2.1b.1 Sequence Name  F53E2.1b.1
Length (nt)  705   Chromosome Location  V: 1469060-1470962
Chromosome . Primary Identifier  V Chromosome Location . Start  1469060
Chromosome Location . End  1470962 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53E2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018757 gid-8 F53E2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53E2.1b F53E2.1b 705   V: 1469060-1469518

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53E2.1b.1 1469060 1470962 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172216   459   V: 1469060-1469518 Caenorhabditis elegans
Exon172218   185   V: 1469571-1469755 Caenorhabditis elegans
Exon172219   61   V: 1470902-1470962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53E2.1b.1 1469060 1470962 1

1 Sequence

Length
705

1 Sequence Ontology Term

Identifier Name Description
transcript