WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00006267 Gene Name  str-239
Sequence Name  ? K02H11.1 Organism  Caenorhabditis elegans
Biotype  SO:0000336 Genetic Position  V :-18.6465 ±0.006774
Length (nt)  ? 1186
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00006267

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

28 Allele

Public Name
WBVar01584604
WBVar01584605
WBVar01584606
gk963591
gk963553
gk964259
gk963850
gk963899
gk963027
tm11268
WBVar00202938
gk227017
gk227015
gk662890
gk227016
gk712782
gk618562
gk609837
gk574004
gk660557
gk596105
gk818777
WBVar01819018
WBVar01819017
WBVar01985542
WBVar01610711
WBVar01458154
ttTi53198

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00006267 1524502 1525687 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_1525688..1526466   779 V: 1525688-1526466 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts depleted at neuron synapses (enriched at the somatic fragments) by comparing presynaptic and somatic cell fragments labeled with different protein markers and sorted by FACS. DESeq2, FDR < 0.05 WBPaper00059027:neuron-synapses_depleted

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00006267 1524502 1525687 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1186

1 Sequence Ontology Term