WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52F10.4a.1 Sequence Name  F52F10.4a.1
Length (nt)  2221   Chromosome Location  V: 1542442-1545783
Chromosome . Primary Identifier  V Chromosome Location . Start  1542442
Chromosome Location . End  1545783 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52F10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018708 oac-32 F52F10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52F10.4a F52F10.4a 2124   V: 1542517-1542667

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52F10.4a.1 1542442 1545783 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172289   226   V: 1542442-1542667 Caenorhabditis elegans
Exon172291   86   V: 1542714-1542799 Caenorhabditis elegans
Exon172293   746   V: 1543309-1544054 Caenorhabditis elegans
Exon172295   548   V: 1544525-1545072 Caenorhabditis elegans
Exon172297   346   V: 1545121-1545466 Caenorhabditis elegans
Exon172300   269   V: 1545515-1545783 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52F10.4a.1 1542442 1545783 -1

1 Sequence

Length
2221

1 Sequence Ontology Term

Identifier Name Description
transcript