WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197355 Gene Name  F52F10.7
Sequence Name  ? F52F10.7 Organism  Caenorhabditis elegans
Automated Description  Is affected by adr-2 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 67
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197355

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52F10.7 F52F10.7 67   V: 1558079-1558145
 

Other

0 CDSs

0 RNAi Result

8 Allele

Public Name
gk963591
gk963553
gk964259
gk963850
gk963899
gk963027
WBVar01819031
WBVar02046144

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00197355 1558079 1558145 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_1558146..1567075   8930 V: 1558146-1567075 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in adr-2(ok735) and adr-2(gv42) comparing to in N2 at L4 larva stage. DESeq FDR <= 0.05 WBPaper00056617:adr-2_upregulated_L4_transcript

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00197355 1558079 1558145 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
67

1 Sequence Ontology Term