WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B4.5b.1 Sequence Name  F16B4.5b.1
Length (nt)  914   Chromosome Location  V: 1588548-1591727
Chromosome . Primary Identifier  V Chromosome Location . Start  1588548
Chromosome Location . End  1591727 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B4.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017507 F16B4.5 F16B4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B4.5b F16B4.5b 381   V: 1589081-1589133

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16B4.5b.1 1588548 1591727 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172352   586   V: 1588548-1589133 Caenorhabditis elegans
Exon172354   137   V: 1589325-1589461 Caenorhabditis elegans
Exon172357   63   V: 1591476-1591538 Caenorhabditis elegans
Exon172360   128   V: 1591600-1591727 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16B4.5b.1 1588548 1591727 1

1 Sequence

Length
914

1 Sequence Ontology Term

Identifier Name Description
transcript