WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16B4.2a.1 Sequence Name  F16B4.2a.1
Length (nt)  1130   Chromosome Location  V: 1601038-1603953
Chromosome . Primary Identifier  V Chromosome Location . Start  1601038
Chromosome Location . End  1603953 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017504 F16B4.2 F16B4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16B4.2a F16B4.2a 1089   V: 1601042-1601184

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16B4.2a.1 1601038 1603953 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172365   147   V: 1601038-1601184 Caenorhabditis elegans
Exon172367   192   V: 1601725-1601916 Caenorhabditis elegans
Exon172369   145   V: 1601975-1602119 Caenorhabditis elegans
Exon172372   285   V: 1602168-1602452 Caenorhabditis elegans
Exon172374   107   V: 1603223-1603329 Caenorhabditis elegans
Exon172376   127   V: 1603374-1603500 Caenorhabditis elegans
Exon172378   127   V: 1603827-1603953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16B4.2a.1 1601038 1603953 1

1 Sequence

Length
1130

1 Sequence Ontology Term

Identifier Name Description
transcript