WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F16B4.11c Sequence Name  F16B4.11c
Length (nt)  1302   Chromosome Location  V: 1615763-1616022
Chromosome . Primary Identifier  V Chromosome Location . Start  1615763
Chromosome Location . End  1616022
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B4.11c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50936 NHR-179, isoform c 49.6 433 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00044785
WBRNAi00031027

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F16B4.11c 1615763 1616022 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017512 nhr-179 F16B4.11 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F16B4.11c 1615763 1616022 -1
CDS:F16B4.11c 1616074 1616189 -1
CDS:F16B4.11c 1616234 1616328 -1
CDS:F16B4.11c 1616395 1616829 -1
CDS:F16B4.11c 1617449 1617540 -1
CDS:F16B4.11c 1617586 1617722 -1
CDS:F16B4.11c 1617776 1617942 -1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F16B4.11c.1 F16B4.11c.1 1396   V: 1615736-1618009