WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F16B4.12a Sequence Name  F16B4.12a
Length (nt)  1308   Chromosome Location  V: 1619452-1619702
Chromosome . Primary Identifier  V Chromosome Location . Start  1619452
Chromosome Location . End  1619702
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16B4.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24906 NHR-117, isoform a 50.8 435 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044786
WBRNAi00044787
WBRNAi00031028

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F16B4.12a 1619452 1619702 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003707 nhr-117 F16B4.12 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F16B4.12a 1619452 1619702 -1
CDS:F16B4.12a 1619744 1619859 -1
CDS:F16B4.12a 1619908 1620002 -1
CDS:F16B4.12a 1620054 1620485 -1
CDS:F16B4.12a 1621009 1621106 -1
CDS:F16B4.12a 1621153 1621292 -1
CDS:F16B4.12a 1621342 1621517 -1

1 Sequence

Length
1308

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F16B4.12a.1 F16B4.12a.1 1348   V: 1619415-1621520