WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46H3D.6b.1 Sequence Name  Y46H3D.6b.1
Length (nt)  1072   Chromosome Location  V: 1625189-1626820
Chromosome . Primary Identifier  V Chromosome Location . Start  1625189
Chromosome Location . End  1626820 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46H3D.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021610 nhr-237 Y46H3D.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46H3D.6b Y46H3D.6b 990   V: 1625225-1625487

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46H3D.6b.1 1625189 1626820 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172552   299   V: 1625189-1625487 Caenorhabditis elegans
Exon172554   228   V: 1625539-1625766 Caenorhabditis elegans
Exon172556   190   V: 1625812-1626001 Caenorhabditis elegans
Exon172558   274   V: 1626055-1626328 Caenorhabditis elegans
Exon172560   81   V: 1626740-1626820 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46H3D.6b.1 1625189 1626820 -1

1 Sequence

Length
1072

1 Sequence Ontology Term

Identifier Name Description
transcript