WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04F1.16.1 Sequence Name  K04F1.16.1
Length (nt)  1002   Chromosome Location  V: 1685628-1686864
Chromosome . Primary Identifier  V Chromosome Location . Start  1685628
Chromosome Location . End  1686864 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04F1.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005231 srh-5 K04F1.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04F1.16 K04F1.16 1002   V: 1685628-1685797

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04F1.16.1 1685628 1686864 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172711   170   V: 1685628-1685797 Caenorhabditis elegans
Exon172712   340   V: 1685843-1686182 Caenorhabditis elegans
Exon172713   234   V: 1686230-1686463 Caenorhabditis elegans
Exon172714   79   V: 1686514-1686592 Caenorhabditis elegans
Exon172715   179   V: 1686686-1686864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04F1.16.1 1685628 1686864 1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
transcript