WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46H3C.5.1 Sequence Name  Y46H3C.5.1
Length (nt)  1190   Chromosome Location  V: 1691029-1692495
Chromosome . Primary Identifier  V Chromosome Location . Start  1691029
Chromosome Location . End  1692495 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46H3C.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021605 Y46H3C.5 Y46H3C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46H3C.5 Y46H3C.5 519   V: 1691029-1691187

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46H3C.5.1 1691029 1692495 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172719   159   V: 1691029-1691187 Caenorhabditis elegans
Exon172720   86   V: 1691235-1691320 Caenorhabditis elegans
Exon172721   103   V: 1691368-1691470 Caenorhabditis elegans
Exon172722   90   V: 1691518-1691607 Caenorhabditis elegans
Exon172723   116   V: 1691655-1691770 Caenorhabditis elegans
Exon172724   636   V: 1691860-1692495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46H3C.5.1 1691029 1692495 -1

1 Sequence

Length
1190

1 Sequence Ontology Term

Identifier Name Description
transcript