WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00200752 Gene Name  ZK697.16
Sequence Name  ? ZK697.16 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position 
Length (nt)  ? 60
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00200752

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK697.16 ZK697.16 60   V: 1743341-1743400
 

Other

0 CDSs

0 RNAi Result

12 Allele

Public Name
gk963301
WBVar01584724
gk963591
gk963553
gk964259
gk963850
gk963027
WBVar02123410
WBVar02123476
WBVar02121237
gk684051
gk421410

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00200752 1743341 1743400 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_1741175..1743340   2166 V: 1741175-1743340 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in postdauer adults comparing to adult animals that bypassed the dauger stage. DESeq 2, FDR < 0.05. WBPaper00064494:postdauer_upregulated_WholeAnimal
Bacteria diet: enterotoxigenic Escherichia coli (ETEC). Transcripts that showed significantly inreased expression after young adult N2 animals were cultured with enterotoxigenic Escherichia coli (ETEC) for five days. DESeq2, log2FC > 2 and p-value < 0.05. WBPaper00066289:Enterotoxigenic-E.coli_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00200752 1743341 1743400 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
60

1 Sequence Ontology Term