WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46H3B.1a.1 Sequence Name  Y46H3B.1a.1
Length (nt)  1754   Chromosome Location  V: 1760893-1765305
Chromosome . Primary Identifier  V Chromosome Location . Start  1760893
Chromosome Location . End  1765305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46H3B.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021602 clec-205 Y46H3B.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46H3B.1a Y46H3B.1a 1674   V: 1760939-1761061

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46H3B.1a.1 1760893 1765305 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172884   169   V: 1760893-1761061 Caenorhabditis elegans
Exon172885   145   V: 1761875-1762019 Caenorhabditis elegans
Exon172886   105   V: 1762074-1762178 Caenorhabditis elegans
Exon172887   149   V: 1762224-1762372 Caenorhabditis elegans
Exon172888   215   V: 1762687-1762901 Caenorhabditis elegans
Exon172889   99   V: 1762950-1763048 Caenorhabditis elegans
Exon172890   239   V: 1763101-1763339 Caenorhabditis elegans
Exon172891   166   V: 1764181-1764346 Caenorhabditis elegans
Exon172893   64   V: 1764428-1764491 Caenorhabditis elegans
Exon172895   124   V: 1764857-1764980 Caenorhabditis elegans
Exon172898   279   V: 1765027-1765305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46H3B.1a.1 1760893 1765305 1

1 Sequence

Length
1754

1 Sequence Ontology Term

Identifier Name Description
transcript