WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H9.5.1 Sequence Name  F36H9.5.1
Length (nt)  1281   Chromosome Location  V: 1779655-1782022
Chromosome . Primary Identifier  V Chromosome Location . Start  1779655
Chromosome Location . End  1782022 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018113 F36H9.5 F36H9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H9.5 F36H9.5 1059   V: 1779873-1780099

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H9.5.1 1779655 1782022 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon172914   445   V: 1779655-1780099 Caenorhabditis elegans
Exon172915   121   V: 1780318-1780438 Caenorhabditis elegans
Exon172916   101   V: 1780496-1780596 Caenorhabditis elegans
Exon172917   143   V: 1780834-1780976 Caenorhabditis elegans
Exon172918   137   V: 1781019-1781155 Caenorhabditis elegans
Exon172919   107   V: 1781202-1781308 Caenorhabditis elegans
Exon172920   139   V: 1781408-1781546 Caenorhabditis elegans
Exon172921   88   V: 1781935-1782022 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H9.5.1 1779655 1782022 -1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
transcript