WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y46H3A.5a Sequence Name  Y46H3A.5a
Length (nt)  1089   Chromosome Location  V: 1811423-1811584
Chromosome . Primary Identifier  V Chromosome Location . Start  1811423
Chromosome Location . End  1811584
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46H3A.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45323 Y46H3A.5, isoform a 41.0 362 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056701
WBRNAi00020181
WBRNAi00020671
WBRNAi00037145
WBRNAi00037146

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y46H3A.5a 1811423 1811584 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021601 Y46H3A.5 Y46H3A.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y46H3A.5a 1811423 1811584 -1
CDS:Y46H3A.5a 1812054 1812566 -1
CDS:Y46H3A.5a 1812639 1812728 -1
CDS:Y46H3A.5a 1813315 1813387 -1
CDS:Y46H3A.5a 1813866 1814116 -1

1 Sequence

Length
1089

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46H3A.5a.1 Y46H3A.5a.1 1935   V: 1811345-1814884