WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10B5.5a.1 Sequence Name  T10B5.5a.1
Length (nt)  1945   Chromosome Location  V: 1872246-1875505
Chromosome . Primary Identifier  V Chromosome Location . Start  1872246
Chromosome Location . End  1875505 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B5.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020391 cct-7 T10B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10B5.5a T10B5.5a 1608   V: 1872252-1872341

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10B5.5a.1 1872246 1875505 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173115   96   V: 1872246-1872341 Caenorhabditis elegans
Exon173117   522   V: 1872400-1872921 Caenorhabditis elegans
Exon173119   711   V: 1873479-1874189 Caenorhabditis elegans
Exon173121   616   V: 1874890-1875505 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10B5.5a.1 1872246 1875505 1

1 Sequence

Length
1945

1 Sequence Ontology Term

Identifier Name Description
transcript