WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y32G9A.8a.2 Sequence Name  Y32G9A.8a.2
Length (nt)  1748   Chromosome Location  V: 1875478-1892939
Chromosome . Primary Identifier  V Chromosome Location . Start  1875478
Chromosome Location . End  1892939 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y32G9A.8a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021305 zig-11 Y32G9A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y32G9A.8a Y32G9A.8a 915   V: 1876201-1876373

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y32G9A.8a.2 1875478 1892939 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173122   896   V: 1875478-1876373 Caenorhabditis elegans
Exon173126   274   V: 1878115-1878388 Caenorhabditis elegans
Exon173129   71   V: 1879503-1879573 Caenorhabditis elegans
Exon173133   215   V: 1879629-1879843 Caenorhabditis elegans
Exon173135   127   V: 1880798-1880924 Caenorhabditis elegans
Exon173137   105   V: 1882136-1882240 Caenorhabditis elegans
Exon173139   60   V: 1892880-1892939 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y32G9A.8a.2 1875478 1892939 -1

1 Sequence

Length
1748

1 Sequence Ontology Term

Identifier Name Description
transcript