WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T06A1.1 Sequence Name  T06A1.1
Length (nt)  1422   Chromosome Location  V: 1923164-1923425
Chromosome . Primary Identifier  V Chromosome Location . Start  1923164
Chromosome Location . End  1923425
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A1.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51046 T06A1.1 56.9 473 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00052598
WBRNAi00035247

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T06A1.1 1923164 1923425 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020277 T06A1.1 T06A1.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T06A1.1 1923164 1923425 -1
CDS:T06A1.1 1923902 1924168 -1
CDS:T06A1.1 1924218 1924321 -1
CDS:T06A1.1 1924401 1924553 -1
CDS:T06A1.1 1924598 1924695 -1
CDS:T06A1.1 1924742 1924932 -1
CDS:T06A1.1 1924990 1925081 -1
CDS:T06A1.1 1925208 1925319 -1
CDS:T06A1.1 1925417 1925559 -1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06A1.1.1 T06A1.1.1 1498   V: 1923116-1925587