WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T06A1.4a Sequence Name  T06A1.4a
Length (nt)  570   Chromosome Location  V: 1944956-1945062
Chromosome . Primary Identifier  V Chromosome Location . Start  1944956
Chromosome Location . End  1945062
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06A1.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40778 GLB-25, isoform a 22.1 189 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052601
WBRNAi00052602
WBRNAi00018265
WBRNAi00009128

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T06A1.4a 1944956 1945062 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020279 glb-25 T06A1.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T06A1.4a 1944956 1945062 1
CDS:T06A1.4a 1945423 1945500 1
CDS:T06A1.4a 1950314 1950437 1
CDS:T06A1.4a 1951751 1951849 1
CDS:T06A1.4a 1952967 1953128 1

1 Sequence

Length
570

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06A1.4a.2 T06A1.4a.2 1294   V: 1938263-1953748
Transcript:T06A1.4a.1 T06A1.4a.1 1185   V: 1944955-1953742