WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B1.6.1 Sequence Name  T08B1.6.1
Length (nt)  2099   Chromosome Location  V: 1969528-1974514
Chromosome . Primary Identifier  V Chromosome Location . Start  1969528
Chromosome Location . End  1974514 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020343 acs-3 T08B1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B1.6 T08B1.6 1962   V: 1969541-1969631

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B1.6.1 1969528 1974514 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173320   104   V: 1969528-1969631 Caenorhabditis elegans
Exon173321   325   V: 1969753-1970077 Caenorhabditis elegans
Exon173322   625   V: 1970912-1971536 Caenorhabditis elegans
Exon173323   72   V: 1972273-1972344 Caenorhabditis elegans
Exon173324   343   V: 1972400-1972742 Caenorhabditis elegans
Exon173325   389   V: 1973815-1974203 Caenorhabditis elegans
Exon173326   241   V: 1974274-1974514 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B1.6.1 1969528 1974514 1

1 Sequence

Length
2099

1 Sequence Ontology Term

Identifier Name Description
transcript