WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08B1.4b.1 Sequence Name  T08B1.4b.1
Length (nt)  1374   Chromosome Location  V: 1979268-1982741
Chromosome . Primary Identifier  V Chromosome Location . Start  1979268
Chromosome Location . End  1982741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08B1.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020341 T08B1.4 T08B1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08B1.4b T08B1.4b 1029   V: 1979438-1979586

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08B1.4b.1 1979268 1982741 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173332   319   V: 1979268-1979586 Caenorhabditis elegans
Exon173335   89   V: 1979977-1980065 Caenorhabditis elegans
Exon173337   56   V: 1980204-1980259 Caenorhabditis elegans
Exon173340   144   V: 1980305-1980448 Caenorhabditis elegans
Exon173343   474   V: 1981069-1981542 Caenorhabditis elegans
Exon173347   292   V: 1982450-1982741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08B1.4b.1 1979268 1982741 1

1 Sequence

Length
1374

1 Sequence Ontology Term

Identifier Name Description
transcript