WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40B10A.3b.1 Sequence Name  Y40B10A.3b.1
Length (nt)  933   Chromosome Location  V: 2033792-2035630
Chromosome . Primary Identifier  V Chromosome Location . Start  2033792
Chromosome Location . End  2035630 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B10A.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021488 srab-23 Y40B10A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40B10A.3b Y40B10A.3b 933   V: 2033792-2033886

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40B10A.3b.1 2033792 2035630 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173466   95   V: 2033792-2033886 Caenorhabditis elegans
Exon173468   193   V: 2033932-2034124 Caenorhabditis elegans
Exon173470   198   V: 2034740-2034937 Caenorhabditis elegans
Exon173472   154   V: 2035032-2035185 Caenorhabditis elegans
Exon173474   81   V: 2035233-2035313 Caenorhabditis elegans
Exon173475   212   V: 2035419-2035630 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40B10A.3b.1 2033792 2035630 -1

1 Sequence

Length
933

1 Sequence Ontology Term

Identifier Name Description
transcript