WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40B10A.8b.1 Sequence Name  Y40B10A.8b.1
Length (nt)  1405   Chromosome Location  V: 2061106-2066850
Chromosome . Primary Identifier  V Chromosome Location . Start  2061106
Chromosome Location . End  2066850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B10A.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003676 nhr-86 Y40B10A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40B10A.8b Y40B10A.8b 1215   V: 2061242-2061346

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40B10A.8b.1 2061106 2066850 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173537   241   V: 2061106-2061346 Caenorhabditis elegans
Exon173539   271   V: 2062238-2062508 Caenorhabditis elegans
Exon173542   185   V: 2063331-2063515 Caenorhabditis elegans
Exon173544   126   V: 2064848-2064973 Caenorhabditis elegans
Exon173546   317   V: 2065663-2065979 Caenorhabditis elegans
Exon173548   265   V: 2066586-2066850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40B10A.8b.1 2061106 2066850 -1

1 Sequence

Length
1405

1 Sequence Ontology Term

Identifier Name Description
transcript