WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y40B10A.8a Sequence Name  Y40B10A.8a
Length (nt)  1224   Chromosome Location  V: 2061242-2061346
Chromosome . Primary Identifier  V Chromosome Location . Start  2061242
Chromosome Location . End  2061346
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B10A.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31110 NHR-86, isoform a 46.8 407 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056309
WBRNAi00007410
WBRNAi00084675

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y40B10A.8a 2061242 2061346 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003676 nhr-86 Y40B10A.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y40B10A.8a 2061242 2061346 -1
CDS:Y40B10A.8a 2062238 2062517 -1
CDS:Y40B10A.8a 2063331 2063515 -1
CDS:Y40B10A.8a 2064848 2064973 -1
CDS:Y40B10A.8a 2065663 2065979 -1
CDS:Y40B10A.8a 2066586 2066796 -1

1 Sequence

Length
1224

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y40B10A.8a.1 Y40B10A.8a.1 1381   V: 2061133-2066844