WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F22F7.4a.1 Sequence Name  F22F7.4a.1
Length (nt)  1587   Chromosome Location  V: 2103658-2106076
Chromosome . Primary Identifier  V Chromosome Location . Start  2103658
Chromosome Location . End  2106076 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F22F7.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017722 F22F7.4 F22F7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F22F7.4a F22F7.4a 1587   V: 2103658-2103952

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F22F7.4a.1 2103658 2106076 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173647   295   V: 2103658-2103952 Caenorhabditis elegans
Exon173650   714   V: 2104129-2104842 Caenorhabditis elegans
Exon173653   116   V: 2104911-2105026 Caenorhabditis elegans
Exon173656   109   V: 2105079-2105187 Caenorhabditis elegans
Exon173660   132   V: 2105424-2105555 Caenorhabditis elegans
Exon173664   72   V: 2105796-2105867 Caenorhabditis elegans
Exon173666   149   V: 2105928-2106076 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F22F7.4a.1 2103658 2106076 -1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript