WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45H4.9.1 Sequence Name  C45H4.9.1
Length (nt)  1216   Chromosome Location  V: 2153574-2155799
Chromosome . Primary Identifier  V Chromosome Location . Start  2153574
Chromosome Location . End  2155799 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45H4.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016691 srbc-23 C45H4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45H4.9 C45H4.9 882   V: 2153574-2153686

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45H4.9.1 2153574 2155799 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173794   113   V: 2153574-2153686 Caenorhabditis elegans
Exon173795   217   V: 2153733-2153949 Caenorhabditis elegans
Exon173796   207   V: 2153993-2154199 Caenorhabditis elegans
Exon173797   93   V: 2154245-2154337 Caenorhabditis elegans
Exon173798   105   V: 2154817-2154921 Caenorhabditis elegans
Exon173799   398   V: 2154966-2155363 Caenorhabditis elegans
Exon173802   83   V: 2155717-2155799 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45H4.9.1 2153574 2155799 1

1 Sequence

Length
1216

1 Sequence Ontology Term

Identifier Name Description
transcript