WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45H4.16.1 Sequence Name  C45H4.16.1
Length (nt)  944   Chromosome Location  V: 2164788-2166779
Chromosome . Primary Identifier  V Chromosome Location . Start  2164788
Chromosome Location . End  2166779 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45H4.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016696 srbc-19 C45H4.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45H4.16 C45H4.16 906   V: 2164826-2164984

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45H4.16.1 2164788 2166779 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173803   197   V: 2164788-2164984 Caenorhabditis elegans
Exon173804   105   V: 2165031-2165135 Caenorhabditis elegans
Exon173805   99   V: 2165182-2165280 Caenorhabditis elegans
Exon173806   207   V: 2165324-2165530 Caenorhabditis elegans
Exon173807   220   V: 2166396-2166615 Caenorhabditis elegans
Exon173808   116   V: 2166664-2166779 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45H4.16.1 2164788 2166779 -1

1 Sequence

Length
944

1 Sequence Ontology Term

Identifier Name Description
transcript