WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y5H2B.5.1 Sequence Name  Y5H2B.5.1
Length (nt)  1648   Chromosome Location  V: 2197997-2201415
Chromosome . Primary Identifier  V Chromosome Location . Start  2197997
Chromosome Location . End  2201415 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y5H2B.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021167 cyp-32B1 Y5H2B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y5H2B.5 Y5H2B.5 1551   V: 2198086-2198447

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y5H2B.5.1 2197997 2201415 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173886   451   V: 2197997-2198447 Caenorhabditis elegans
Exon173887   500   V: 2199143-2199642 Caenorhabditis elegans
Exon173888   100   V: 2199885-2199984 Caenorhabditis elegans
Exon173889   194   V: 2200029-2200222 Caenorhabditis elegans
Exon173890   86   V: 2200268-2200353 Caenorhabditis elegans
Exon173891   54   V: 2201011-2201064 Caenorhabditis elegans
Exon173892   71   V: 2201109-2201179 Caenorhabditis elegans
Exon173893   192   V: 2201224-2201415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y5H2B.5.1 2197997 2201415 -1

1 Sequence

Length
1648

1 Sequence Ontology Term

Identifier Name Description
transcript