WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y5H2B.7.1 Sequence Name  Y5H2B.7.1
Length (nt)  1002   Chromosome Location  V: 2205030-2206281
Chromosome . Primary Identifier  V Chromosome Location . Start  2205030
Chromosome Location . End  2206281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y5H2B.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021169 srt-40 Y5H2B.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y5H2B.7 Y5H2B.7 1002   V: 2205030-2205311

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y5H2B.7.1 2205030 2206281 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon173959   282   V: 2205030-2205311 Caenorhabditis elegans
Exon173960   274   V: 2205355-2205628 Caenorhabditis elegans
Exon173961   299   V: 2205755-2206053 Caenorhabditis elegans
Exon173962   91   V: 2206096-2206186 Caenorhabditis elegans
Exon173963   56   V: 2206226-2206281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y5H2B.7.1 2205030 2206281 -1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
transcript