WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44C8.11.1 Sequence Name  F44C8.11.1
Length (nt)  1256   Chromosome Location  V: 2233477-2235180
Chromosome . Primary Identifier  V Chromosome Location . Start  2233477
Chromosome Location . End  2235180 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44C8.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003686 nhr-96 F44C8.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44C8.11 F44C8.11 1209   V: 2233482-2233648

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44C8.11.1 2233477 2235180 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174031   172   V: 2233477-2233648 Caenorhabditis elegans
Exon174032   59   V: 2233702-2233760 Caenorhabditis elegans
Exon174033   206   V: 2233816-2234021 Caenorhabditis elegans
Exon174034   222   V: 2234087-2234308 Caenorhabditis elegans
Exon174035   191   V: 2234529-2234719 Caenorhabditis elegans
Exon174036   406   V: 2234775-2235180 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44C8.11.1 2233477 2235180 1

1 Sequence

Length
1256

1 Sequence Ontology Term

Identifier Name Description
transcript