WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27B7.5a.1 Sequence Name  T27B7.5a.1
Length (nt)  759   Chromosome Location  V: 2285432-2287480
Chromosome . Primary Identifier  V Chromosome Location . Start  2285432
Chromosome Location . End  2287480 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27B7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020851 nhr-227 T27B7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27B7.5a T27B7.5a 723   V: 2285432-2285526

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27B7.5a.1 2285432 2287480 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174170   95   V: 2285432-2285526 Caenorhabditis elegans
Exon174172   61   V: 2285577-2285637 Caenorhabditis elegans
Exon174176   191   V: 2286358-2286548 Caenorhabditis elegans
Exon174178   268   V: 2287022-2287289 Caenorhabditis elegans
Exon174181   144   V: 2287337-2287480 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27B7.5a.1 2285432 2287480 1

1 Sequence

Length
759

1 Sequence Ontology Term

Identifier Name Description
transcript