WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27B7.4a Sequence Name  T27B7.4a
Length (nt)  1176   Chromosome Location  V: 2292596-2292693
Chromosome . Primary Identifier  V Chromosome Location . Start  2292596
Chromosome Location . End  2292693
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27B7.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35785 NHR-115, isoform a 46.3 391 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00115853
WBRNAi00019310
WBRNAi00054276

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27B7.4a 2292596 2292693 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003705 nhr-115 T27B7.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27B7.4a 2292596 2292693 1
CDS:T27B7.4a 2292738 2292800 1
CDS:T27B7.4a 2292859 2292917 1
CDS:T27B7.4a 2292963 2293348 1
CDS:T27B7.4a 2293405 2293598 1
CDS:T27B7.4a 2294315 2294582 1
CDS:T27B7.4a 2294629 2294736 1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27B7.4a.1 T27B7.4a.1 1296   V: 2292540-2294800