WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y19D10A.8a.1 Sequence Name  Y19D10A.8a.1
Length (nt)  1377   Chromosome Location  V: 2353359-2356582
Chromosome . Primary Identifier  V Chromosome Location . Start  2353359
Chromosome Location . End  2356582 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y19D10A.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021223 Y19D10A.8 Y19D10A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y19D10A.8a Y19D10A.8a 1377   V: 2353359-2353481

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y19D10A.8a.1 2353359 2356582 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174391   123   V: 2353359-2353481 Caenorhabditis elegans
Exon174393   117   V: 2353529-2353645 Caenorhabditis elegans
Exon174394   162   V: 2354566-2354727 Caenorhabditis elegans
Exon174395   301   V: 2354772-2355072 Caenorhabditis elegans
Exon174396   478   V: 2355791-2356268 Caenorhabditis elegans
Exon174397   107   V: 2356318-2356424 Caenorhabditis elegans
Exon174398   89   V: 2356494-2356582 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y19D10A.8a.1 2353359 2356582 -1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript