WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13B7.3a.1 Sequence Name  C13B7.3a.1
Length (nt)  1023   Chromosome Location  V: 2419081-2421583
Chromosome . Primary Identifier  V Chromosome Location . Start  2419081
Chromosome Location . End  2421583 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13B7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005137 srd-60 C13B7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13B7.3a C13B7.3a 1023   V: 2419081-2419277

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13B7.3a.1 2419081 2421583 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174504   197   V: 2419081-2419277 Caenorhabditis elegans
Exon174506   97   V: 2419481-2419577 Caenorhabditis elegans
Exon174508   135   V: 2419628-2419762 Caenorhabditis elegans
Exon174510   276   V: 2420281-2420556 Caenorhabditis elegans
Exon174512   79   V: 2420883-2420961 Caenorhabditis elegans
Exon174516   159   V: 2421283-2421441 Caenorhabditis elegans
Exon174520   80   V: 2421504-2421583 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13B7.3a.1 2419081 2421583 1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
transcript