WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A4.9b.1 Sequence Name  F56A4.9b.1
Length (nt)  1077   Chromosome Location  V: 2456176-2458286
Chromosome . Primary Identifier  V Chromosome Location . Start  2456176
Chromosome Location . End  2458286 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A4.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018917 irld-35 F56A4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A4.9b F56A4.9b 1077   V: 2456176-2456285

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A4.9b.1 2456176 2458286 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174608   110   V: 2456176-2456285 Caenorhabditis elegans
Exon174612   148   V: 2456334-2456481 Caenorhabditis elegans
Exon174618   65   V: 2456540-2456604 Caenorhabditis elegans
Exon174628   364   V: 2456652-2457015 Caenorhabditis elegans
Exon174639   275   V: 2457828-2458102 Caenorhabditis elegans
Exon174643   115   V: 2458172-2458286 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A4.9b.1 2456176 2458286 -1

1 Sequence

Length
1077

1 Sequence Ontology Term

Identifier Name Description
transcript