WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A4.10a.1 Sequence Name  F56A4.10a.1
Length (nt)  1413   Chromosome Location  V: 2461320-2464579
Chromosome . Primary Identifier  V Chromosome Location . Start  2461320
Chromosome Location . End  2464579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A4.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018918 F56A4.10 F56A4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A4.10a F56A4.10a 1413   V: 2461320-2461442

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A4.10a.1 2461320 2464579 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174650   123   V: 2461320-2461442 Caenorhabditis elegans
Exon174653   117   V: 2461490-2461606 Caenorhabditis elegans
Exon174654   162   V: 2462527-2462688 Caenorhabditis elegans
Exon174655   301   V: 2462733-2463033 Caenorhabditis elegans
Exon174656   478   V: 2463752-2464229 Caenorhabditis elegans
Exon174657   107   V: 2464279-2464385 Caenorhabditis elegans
Exon174658   125   V: 2464455-2464579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A4.10a.1 2461320 2464579 -1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
transcript