WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45G12C.16.1 Sequence Name  Y45G12C.16.1
Length (nt)  582   Chromosome Location  V: 2530146-2531174
Chromosome . Primary Identifier  V Chromosome Location . Start  2530146
Chromosome Location . End  2531174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45G12C.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044131 Y45G12C.16 Y45G12C.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45G12C.16 Y45G12C.16 582   V: 2530146-2530292

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45G12C.16.1 2530146 2531174 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174768   147   V: 2530146-2530292 Caenorhabditis elegans
Exon174769   74   V: 2530345-2530418 Caenorhabditis elegans
Exon174770   126   V: 2530466-2530591 Caenorhabditis elegans
Exon174771   92   V: 2530645-2530736 Caenorhabditis elegans
Exon174772   143   V: 2531032-2531174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45G12C.16.1 2530146 2531174 1

1 Sequence

Length
582

1 Sequence Ontology Term

Identifier Name Description
transcript