WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45G12C.9a.1 Sequence Name  Y45G12C.9a.1
Length (nt)  972   Chromosome Location  V: 2531566-2534485
Chromosome . Primary Identifier  V Chromosome Location . Start  2531566
Chromosome Location . End  2534485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45G12C.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021572 srd-72 Y45G12C.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45G12C.9a Y45G12C.9a 972   V: 2531566-2531756

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45G12C.9a.1 2531566 2534485 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon174776   191   V: 2531566-2531756 Caenorhabditis elegans
Exon174778   158   V: 2532219-2532376 Caenorhabditis elegans
Exon174780   194   V: 2532819-2533012 Caenorhabditis elegans
Exon174784   141   V: 2533673-2533813 Caenorhabditis elegans
Exon174786   97   V: 2534149-2534245 Caenorhabditis elegans
Exon174788   191   V: 2534295-2534485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45G12C.9a.1 2531566 2534485 -1

1 Sequence

Length
972

1 Sequence Ontology Term

Identifier Name Description
transcript